Protein Concentration Equation:
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The A280 method estimates protein concentration by measuring absorbance at 280 nm, which is primarily due to tryptophan and tyrosine residues. The fat correction (FC) accounts for light scattering by lipid particles that can interfere with absorbance measurements.
The calculator uses the protein concentration equation:
Where:
Explanation: The equation first calculates the apparent protein concentration from absorbance, then subtracts the contribution from light scattering by fat particles.
Details: In samples containing lipids or fat, light scattering can artificially increase A280 readings. The fat correction accounts for this interference to provide more accurate protein concentration measurements.
Tips:
Q1: How do I determine the extinction coefficient?
A: Calculate from protein sequence (theoretical) or measure experimentally using known concentrations.
Q2: When is fat correction necessary?
A: For samples containing >0.5% lipids, membrane preparations, or any visibly turbid solutions.
Q3: What's a typical extinction coefficient?
A: For antibodies ~1.4 ml mg-1 cm-1; varies greatly by protein (0.5-2.5 range common).
Q4: How accurate is this method?
A: ±10-20% typically, assuming proper blanking and known extinction coefficient.
Q5: Are there alternatives to A280 measurement?
A: Yes, Bradford, BCA, or Lowry assays may be better for lipid-rich samples.